Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924032.1_cds_XP_016472498.1_64728
CDS Infomation

[gene=LOC107794513] [db_xref=GeneID:107794513] [protein=pentatricopeptide repeat-containing protein At4g35850, mitochondrial-like] [protein_id=XP_016472498.1] [location=complement(join(23042..23140,23590..23691,23803..23880,23963..24028,24620..24713,25786..25862,26784..26993,27082..27199,27636..27733,27847..27912,28377..28539,28628..28763,28876..28900))] [gbkey=CDS]
Sequence

ATGAAACTCCTCCGAACCCTCTCTGGACCCAGAAATCTACTGATTCGAACTATAGGGCGT
CGATACTTCGCGGCTACACCGGAAGAGTACGCCAAGAGAAACTACGCTAACAATGAGGCT
GAATACAGCACTGTTATTAGCTCTCTTACTGCTCAGCGAAGGCATTATTTGTTGAGGGAT
GTTTATGATGACATGATGCTGGATGGTGTAAAGCCAGAGAGAGATACATTTCATTCACTT
CTTATTGGGACAATGAAAGGTGCTCGCTTGCAAGACGCTTTCTTTTTCCGTGACGAAATG
AAAGCCATGGGCTTGGTCCCTGATGTTGCTTTGTACAATTTCATGATATCTACATGTGGA
AAATGTAAAAATTCGGAACAAGCAGTAAGGCTTTTGGAAGAAATGAAGAGATTTGAAGTC
AAGCCTACTGGACAGACCTATATCTGTCTCCTCAATGCGTGTGCAGCTGCTGGTCGGGTA
GACAGAGTGTATGCAATTGTTAGGGACATGACTGCTGCTGGTCTTGGTCTTAATAAATTC
TGCTATGCTGGACTTATAGCTGCTCACAAGAATAAGGAACCTGTCACTGATGATGTAGCT
TCCAAGATTCTTGAGCTAGTTGAGCAGTCCAAGGGTTGGTCAGCAGTTGAAGCACCTAGT
GACATTCCAGTAAGATCCATGATGGGCATGTCTGAAGAAGAACTTTACAATATCCCAACT
GCTGAGTTTGTTTTCCGGCGTGGTGGATTTTTAAATAGGGAATTCACCGTTTATCATGTT
GCATTTCATTCCTGTGCAGACCTAAAAAATGTGGAGGCGATCGATGCACTTCTTGAGATG
CTTAGCAAGGACGGTAAAACACCTGATGTGTTCATTTTGATGGAAACCATGAGGTGTTAT
CTTCATTCTGGGGATCTGCAACGTGGTCGTAAACTTTTTGAGGACTACATGAGTTCGGGA
AAACCACCTATGATTGAATTATATGTGACACTTGTTGAGGGAGCAATGGTCGGTTACACT
CCTGACGGGATGCAACTCGCTCAAGAGACACTGGTAAACATGAACTCCAGGAACTTCTTC
CTGAGTCCTAAAATGGGAAGTGATCTCCTTCTTGTTGCTGCGGGTGAAAAGACTGGTGGA
TATACTACTGCCAATCTGATATGGGACATGATGCAAGCTCGTAAAATTATACCAACATTT
CCTGCTGTTCAAGCGTATTACGACGGCTTGAAGGTTCGGGAGATACCAGCTGATGATCCA
AGACTGCAACTAGTTTCTCGAACCTACAATAATCTGAGAAAGAGGTTTGGTGTGGGAGCT
GGACGACCGTAG

Peptide Sequence

PEP ID

XP_016472498.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial-like [Nicotiana tabacum]
Sequence

MKLLRTLSGPRNLLIRTIGRRYFAATPEEYAKRNYANNEAEYSTVISSLTAQRRHYLLRD
VYDDMMLDGVKPERDTFHSLLIGTMKGARLQDAFFFRDEMKAMGLVPDVALYNFMISTCG
KCKNSEQAVRLLEEMKRFEVKPTGQTYICLLNACAAAGRVDRVYAIVRDMTAAGLGLNKF
CYAGLIAAHKNKEPVTDDVASKILELVEQSKGWSAVEAPSDIPVRSMMGMSEEELYNIPT
AEFVFRRGGFLNREFTVYHVAFHSCADLKNVEAIDALLEMLSKDGKTPDVFILMETMRCY
LHSGDLQRGRKLFEDYMSSGKPPMIELYVTLVEGAMVGYTPDGMQLAQETLVNMNSRNFF
LSPKMGSDLLLVAAGEKTGGYTTANLIWDMMQARKIIPTFPAVQAYYDGLKVREIPADDP
RLQLVSRTYNNLRKRFGVGAGRP

Transcript Sequence

Gene sequence data has not been registered.